Direct observation of topoisomerase IA gate dynamics

Direct observation of steady-state microtubule dynamics

Different types of unusual dynamic behavior have been reported for steady-state microtubules. While almost all earlier reports relied on kinetic measurements of bulk polymerization, we have directly visualized the steady-state addition of subunits to individual microtubules through the use of tubulin derivitized with biotin. Biotinylated tubulin was used both as an internal "seed" for polymeriz...

DNA Topoisomerase Ia Affects the Floral Transition

DNA topoisomerases modulate DNA topology to maintain chromosome superstructure and genome integrity, which is indispensable for DNA replication and RNA transcription. Their function in plant development still remains largely unknown. Here, we report a hitherto unidentified role of Topoisomerase Ia (TOP1a) in controlling flowering time in Arabidopsis (Arabidopsis thaliana). Loss of function of T...

DNA transport by a type II topoisomerase: direct evidence for a two-gate mechanism.

Recent biochemical and crystallographic results suggest that a type II DNA topoisomerase acts as an ATP-modulated clamp with two sets of jaws at opposite ends: a DNA-bound enzyme can admit a second DNA through one set of jaws; upon binding ATP, this DNA is passed through an enzyme-mediated opening in the first DNA and expelled from the enzyme through the other set of jaws. Experiments based on ...

Direct observation of confined single chain dynamics by neutron scattering.

Neutron spin echo has revealed the single chain dynamic structure factor of entangled polymer chains confined in cylindrical nanopores with chain dimensions either much larger or smaller than the lateral pore sizes. In both situations, a slowing down of the dynamics with respect to the bulk behavior is only observed at intermediate times. The results at long times provide a direct microscopic m...

Direct observation of resonant tunneling dynamics in high magnetic fields.